BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G06SP1|AL428780
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig931 1221 0.0
3x_Contig1780 557 e-158
>3x_Contig931
Length = 3901
Score = 1221 bits (616), Expect = 0.0
Identities = 630/632 (99%), Gaps = 2/632 (0%)
Strand = Plus / Minus
Query: 289 agggttttgatggtatttttttcatgaacaattcgatgtgatgtctgggttgtggtgata 348
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 agggttttgatggtatttttt-catgaacaattcgatgtgatgtctgggttgtggtgata 3843
Query: 349 ctgtgaaagtaatggcctctttgaagggaaatggttacgaagctttagcttgttgaaggt 408
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 ctgtgaaagtaatggcctctt-gaagggaaatggttacgaagctttagcttgttgaaggt 3784
Query: 409 gaaatatcatcatcgtgttacatgacttgcaaaaattttagcaatggtgatctttaactg 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3783 gaaatatcatcatcgtgttacatgacttgcaaaaattttagcaatggtgatctttaactg 3724
Query: 469 tgatatctttaaatcatccaacaaaagtatgcaaaacgaagcgaacatatctatcggctg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3723 tgatatctttaaatcatccaacaaaagtatgcaaaacgaagcgaacatatctatcggctg 3664
Query: 529 ctccttcaagttaaacagaaggtctgctttgtgtcatttttagtagataggcatctctgt 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3663 ctccttcaagttaaacagaaggtctgctttgtgtcatttttagtagataggcatctctgt 3604
Query: 589 taagcaatccaggatgctctctgtcagaatttctgccaggcaatgttctgtgcgcggatt 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3603 taagcaatccaggatgctctctgtcagaatttctgccaggcaatgttctgtgcgcggatt 3544
Query: 649 ggcaactcaagcgaacaatgtttctcaaccagctaaagacaacgcaactaacggcagcga 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3543 ggcaactcaagcgaacaatgtttctcaaccagctaaagacaacgcaactaacggcagcga 3484
Query: 709 tgctgcaactgagaaaaagggaacagctagatatcaacgaattcagccttcggtggccct 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3483 tgctgcaactgagaaaaagggaacagctagatatcaacgaattcagccttcggtggccct 3424
Query: 769 aaatagtttgaaaactaaattatcgaatgatttccagaagcagcaaccagctcaaaaaat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3423 aaatagtttgaaaactaaattatcgaatgatttccagaagcagcaaccagctcaaaaaat 3364
Query: 829 atactctcagttccaatcggatctacaacaattaatttctgagcagcaagtcaatccaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363 atactctcagttccaatcggatctacaacaattaatttctgagcagcaagtcaatccaag 3304
Query: 889 acatttcgttaacagctctatctgtaactccg 920
||||||||||||||||||||||||||||||||
Sbjct: 3303 acatttcgttaacagctctatctgtaactccg 3272
>3x_Contig1780
Length = 27883
Score = 557 bits (281), Expect = e-158
Identities = 297/301 (98%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 1 ggttcaaaacccagaagggttgaccctaacaggctcctttatgaaatcaccttttgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27579 ggttcaaaacccagaagggttgaccctaacaggctcctttatgaaatcaccttttgctct 27638
Query: 61 atactgggtactcgaaga-ttaatttctggccaagttactgaggaaaggaggcgatatag 119
|||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 27639 atactgggtactcgaagagttaatttctggccaagttactgcggaaagaaggcgatatag 27698
Query: 120 cttcatcagttaattctgattcaaattctattaacctatcatgtatgactgccaactgac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27699 cttcatcagttaattctgattcaaattctattaacctatcatgtatgactgccaactgac 27758
Query: 180 gatgtcttgttattcttccgttcacatgtagagggtgcgctcatgcctattgctgaaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27759 gatgtcttgttattcttccgttcacatgtagagggtgcgctcatgcctattgctgaaaaa 27818
Query: 240 ttcgacattggggactttgggattcgaactaccgccaatatactcatgaagggttttgat 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 27819 ttcgacattggggactttgggattcgaactaccgccaatatactcatgcagggttttgat 27878
Query: 300 g 300
|
Sbjct: 27879 g 27879
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6661
Number of Sequences: 1807
Number of extensions: 6661
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)